BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E01SP1|AL428909
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig591 565 e-161
>3x_Contig591
Length = 1630
Score = 565 bits (285), Expect = e-161
Identities = 313/321 (97%), Gaps = 1/321 (0%)
Strand = Plus / Minus
Query: 542 tagaagaaatgtcatcaatgtttctctcatccgaagtgtataaatcactttcggaaagca 601
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 1630 tagaagaaatgtcatcaatgtttctctcaaccgaagtgtgtaaatcactttcggaaaaca 1571
Query: 602 acttagtgaaatcgtacccatcatcagcagatattcttttgtaaagaccagtggttaaac 661
|||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||
Sbjct: 1570 acttagtgaaatcgtacccaacaacaacagatatacttttgtaaagaccagtggttaaac 1511
Query: 662 tgtctaatgatcttttcgcaaaatcgttaaactgcgttgtaaatcctcttttctgcactg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1510 tgtctaatgatcttttcgcaaaatcgttaaactgcgttgtaaatcctcttttctgcactg 1451
Query: 722 agatggatagaatatctttgtttgctacgaccacaacaggggtaccgccagtagcagtaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1450 agatggatagaatatctttgtttgctacgaccacaacaggggtaccgccagtagcagtaa 1391
Query: 782 cataccaatcgaatatattttgcatgaaccccactttaatcatacccatggaccattgga 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1390 cataccaatcgaatatattttgcatgaaccccactttaatcatacccatggaccattgga 1331
Query: 842 aattttggggtccaagcggca 862
|||||| ||||||||||||||
Sbjct: 1330 aatttt-gggtccaagcggca 1311
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6268
Number of Sequences: 1807
Number of extensions: 6268
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)